miRBase entry: dvi-mir-9693

Stem-loop dvi-mir-9693

Accession

MI0030934

Description

Drosophila virilis dvi-mir-9693 precursor miRNA

Sequence

ugGAAUCACGACACUCAACUGUUAUguagaaaacgauAACAGUGAGUCUCGCGUUC
..(((.(.(((.(((((.(((((((((.....)).)))))))))))).))).))))

Structure

ug   U A   C     A       -  a 
  GAA C CGA ACUCA CUGUUAU gu g
  ||| | ||| ||||| ||||||| || a
  CUU G GCU UGAGU GACAAua ca a
--   - C   C     -       g  a

Annotation confidence Not enough data

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Genome context

scaffold_13042: 907106-907161 [-]

Clustered miRNAs

11 other miRNAs are < 10 kb from dvi-mir-9693

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dvi-miR-9693-5p

Accession	MIMAT0039226
Description	Drosophila virilis dvi-miR-9693-5p mature miRNA
Sequence	3 - GAAUCACGACACUCAACUGUUAU - 25
Evidence	experimental Illumina [1]

Mature dvi-miR-9693-3p

Accession	MIMAT0039227
Description	Drosophila virilis dvi-miR-9693-3p mature miRNA
Sequence	38 - AACAGUGAGUCUCGCGUUC - 56
Evidence	experimental Illumina [1]

References

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250