Stem-loop dvi-mir-9693

Accession

MI0030934

Description

Drosophila virilis dvi-mir-9693 precursor miRNA

Sequence

ugGAAUCACGACACUCAACUGUUAUguagaaaacgauAACAGUGAGUCUCGCGUUC
..(((.(.(((.(((((.(((((((((.....)).)))))))))))).))).))))

Structure

ug   U A   C     A       -  a 
  GAA C CGA ACUCA CUGUUAU gu g
  ||| | ||| ||||| ||||||| || a
  CUU G GCU UGAGU GACAAua ca a
--   - C   C     -       g  a 

Annotation confidence Low

Genome context

scaffold_13042: 907106-907161 [-]

Clustered miRNAs

11 other miRNAs are < 10 kb from dvi-mir-9693

Mature dvi-miR-9693-5p

• Accession: MIMAT0039226
• Description: Drosophila virilis dvi-miR-9693-5p mature miRNA
• Sequence: 3 - GAAUCACGACACUCAACUGUUAU - 25
• Evidence: experimental ; Illumina [1]

Mature dvi-miR-9693-3p

• Accession: MIMAT0039227
• Description: Drosophila virilis dvi-miR-9693-3p mature miRNA
• Sequence: 38 - AACAGUGAGUCUCGCGUUC - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24985917
   Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
   "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
   "Genome Res (2014) 24:1236-1250