Stem-loop dvi-mir-9695

Accession

MI0030936

Description

Drosophila virilis dvi-mir-9695 precursor miRNA

Sequence

UUAGUUGCUAAUGUGGCCGAUAUuuucaauauguuguguuaauauugcaugggcauaugcaaaaaUAAGGCACUUUAGCAGCCAAGAg
...((((((((.(((.((..((((((..(((((((.(((.......)))..)))))))...)))))).))))).))))))))......

Structure

---UUA        U   G  GA      -ca       -g   ua 
      GUUGCUAA GUG CC  UAUuuu   auauguu  ugu  a
      |||||||| ||| ||  ||||||   |||||||  |||  u
      CGACGAUU CAC GG  AUaaaa   uauacgg  acg  a
gAGAAC        U   -  -A      acg       gu   uu 

Annotation confidence Low

Genome context

scaffold_13042: 903358-903445 [-]

Clustered miRNAs

11 other miRNAs are < 10 kb from dvi-mir-9695

Mature dvi-miR-9695-5p

• Accession: MIMAT0039230
• Description: Drosophila virilis dvi-miR-9695-5p mature miRNA
• Sequence: 1 - UUAGUUGCUAAUGUGGCCGAUAU - 23
• Evidence: experimental ; Illumina [1]

Mature dvi-miR-9695-3p

• Accession: MIMAT0039231
• Description: Drosophila virilis dvi-miR-9695-3p mature miRNA
• Sequence: 66 - UAAGGCACUUUAGCAGCCAAGA - 87
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24985917
   Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
   "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
   "Genome Res (2014) 24:1236-1250