Stem-loop dvi-mir-9697

Accession

MI0030939

Description

Drosophila virilis dvi-mir-9697 precursor miRNA

Sequence

14826 reads, 51.0 reads per million, 28 experiments

AGCCGUUCCUGAAGUGUCAAAUaguagguacuacucguaagaaaauguacguugauuuuuauUUGGCACAUCAGUGACAGCAUG
.((.(((.((((.((((((((((((((((((...((....))....)))).)))....))))))))))).)))).))).))...

Structure

--A  C   C    A           ----   -    -uac  g 
   GC GUU CUGA GUGUCAAAUag    uag guac    uc u
   || ||| |||| |||||||||||    ||| ||||    ||  
   CG CAG GACU CACGGUUuauu    guu caug    ag a
GUA  A   U    A           uuua   g    uaaa  a 

Annotation confidence Medium

Genome context

scaffold_13042: 903020-903103 [-]

Clustered miRNAs

11 other miRNAs are < 10 kb from dvi-mir-9697

Mature dvi-miR-9697-5p

• Accession: MIMAT0039236
• Description: Drosophila virilis dvi-miR-9697-5p mature miRNA
• Sequence: 1 - AGCCGUUCCUGAAGUGUCAAAU - 22
• Evidence: experimental ; Illumina [1]

Mature dvi-miR-9697-3p

• Accession: MIMAT0039237
• Description: Drosophila virilis dvi-miR-9697-3p mature miRNA
• Sequence: 63 - UUGGCACAUCAGUGACAGCAUG - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24985917
   Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
   "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
   "Genome Res (2014) 24:1236-1250