miRBase entry: dvi-mir-9698

Stem-loop dvi-mir-9698

Accession

MI0030940

Description

Drosophila virilis dvi-mir-9698 precursor miRNA

Sequence

GAACUCGAUUCUCCUCUGUCAUaugcggacgauaacuaUGGCAGUGAGGGUGGGGUUUCCu
((((((.((((((..((((((((.............)))))))).)))))).))))))...

Structure

---      G      CU        ugcgg 
   GAACUC AUUCUC  CUGUCAUa     a
   |||||| ||||||  ||||||||     c
   UUUGGG UGGGAG  GACGGUau     g
uCC      G      -U        caaua

Annotation confidence Not enough data

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Genome context

scaffold_13042: 902871-902931 [-]

Clustered miRNAs

11 other miRNAs are < 10 kb from dvi-mir-9698

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dvi-miR-9698-5p

Accession	MIMAT0039238
Description	Drosophila virilis dvi-miR-9698-5p mature miRNA
Sequence	1 - GAACUCGAUUCUCCUCUGUCAU - 22
Evidence	experimental Illumina [1]

Mature dvi-miR-9698-3p

Accession	MIMAT0039239
Description	Drosophila virilis dvi-miR-9698-3p mature miRNA
Sequence	39 - UGGCAGUGAGGGUGGGGUUUCC - 60
Evidence	experimental Illumina [1]

References

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250