miRBase entry: dvi-mir-9699

Stem-loop dvi-mir-9699

Accession

MI0030941

Description

Drosophila virilis dvi-mir-9699 precursor miRNA

Sequence

GUACUCUACGCUUUUGGGAACGagcucuuugacgcacucGGUUCCAUUGCCGUUGAGUAGAg
.(((((.(((....(((((.((((..(......)..)))).)))))....))).)))))...

Structure

--G     U   CUUU     A    cu uu 
   UACUC ACG    UGGGA CGag  c  u
   ||||| |||    ||||| ||||  |   
   AUGAG UGC    ACCUU Gcuc  g  g
gAG     U   CGUU     G    ac ca

Annotation confidence Not enough data

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Genome context

scaffold_13042: 902700-902761 [-]

Clustered miRNAs

11 other miRNAs are < 10 kb from dvi-mir-9699

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dvi-miR-9699-5p

Accession	MIMAT0039240
Description	Drosophila virilis dvi-miR-9699-5p mature miRNA
Sequence	1 - GUACUCUACGCUUUUGGGAACG - 22
Evidence	experimental Illumina [1]

Mature dvi-miR-9699-3p

Accession	MIMAT0039241
Description	Drosophila virilis dvi-miR-9699-3p mature miRNA
Sequence	40 - GGUUCCAUUGCCGUUGAGUAGA - 61
Evidence	experimental Illumina [1]

References

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250