Stem-loop dvi-mir-9700a

Accession

MI0030944

Description

Drosophila virilis dvi-mir-9700a precursor miRNA

Sequence

AAGCACAAUCAAUAGACAAUAUguuguaaguaaacaauAUUGUCUAAUGUUUAUGCGUCAg
..(((.((.((.(((((((((((((.......))).)))))))))).)).)).))).....

Structure

---AA   C  U  A          -   gu 
     GCA AA CA UAGACAAUAU guu  a
     ||| || || |||||||||| |||  a
     CGU UU GU AUCUGUUAua caa  g
gACUG   A  U  A          a   au 

Annotation confidence Low

Genome context

scaffold_12855: 6284216-6284276 [-]

Clustered miRNAs

9 other miRNAs are < 10 kb from dvi-mir-9700a

Mature dvi-miR-9700a-5p

• Accession: MIMAT0039246
• Description: Drosophila virilis dvi-miR-9700a-5p mature miRNA
• Sequence: 1 - AAGCACAAUCAAUAGACAAUAU - 22
• Evidence: experimental ; Illumina [1]

Mature dvi-miR-9700a-3p

• Accession: MIMAT0039247
• Description: Drosophila virilis dvi-miR-9700a-3p mature miRNA
• Sequence: 39 - AUUGUCUAAUGUUUAUGCGUCA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24985917
   Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
   "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
   "Genome Res (2014) 24:1236-1250