miRBase entry: dvi-mir-9700b

Stem-loop dvi-mir-9700b

Accession

MI0030945

Description

Drosophila virilis dvi-mir-9700b precursor miRNA

Sequence

CGCAUAAACAUUAGACAAUAUUguuuacuuacaacaUAUUGUCUAUUGAUUGUGCUUc
.((((((.((.(((((((((((((......)))..)))))))))).)).))))))...

Structure

--C      A  U          --   uu 
   GCAUAA CA UAGACAAUAU  Ugu  a
   |||||| || ||||||||||  |||   
   CGUGUU GU AUCUGUUAUa  aca  c
cUU      A  U          ca   uu

Annotation confidence Not enough data

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Genome context

scaffold_12855: 6284220-6284277 [+]

Clustered miRNAs

9 other miRNAs are < 10 kb from dvi-mir-9700b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dvi-miR-9700b-5p

Accession	MIMAT0039248
Description	Drosophila virilis dvi-miR-9700b-5p mature miRNA
Sequence	1 - CGCAUAAACAUUAGACAAUAUU - 22
Evidence	experimental Illumina [1]

Mature dvi-miR-9700b-3p

Accession	MIMAT0039249
Description	Drosophila virilis dvi-miR-9700b-3p mature miRNA
Sequence	37 - UAUUGUCUAUUGAUUGUGCUU - 57
Evidence	experimental Illumina [1]

References

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250