miRBase entry: dvi-mir-9701a

Stem-loop dvi-mir-9701a

Accession

MI0030946

Description

Drosophila virilis dvi-mir-9701a precursor miRNA

Sequence

CUGUGUACCACCAUCAACUUUCUgcauuuagaaacucaauuaagAAAAUUGAUGUGGUUCACCGCUg
..(((.(((((.(((((.(((((..(((.((...)).)))..))))).)))))))))).))).....

Structure

---CU   U     C     C     gc   u  a 
     GUG ACCAC AUCAA UUUCU  auu ag  
     ||| ||||| ||||| |||||  ||| || a
     CAC UGGUG UAGUU AAAga  uaa uc  
gUCGC   U     -     A     au   c  a

Annotation confidence Not enough data

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Genome context

scaffold_12855: 6284350-6284416 [-]

Clustered miRNAs

9 other miRNAs are < 10 kb from dvi-mir-9701a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dvi-miR-9701a-5p

Accession	MIMAT0039250
Description	Drosophila virilis dvi-miR-9701a-5p mature miRNA
Sequence	1 - CUGUGUACCACCAUCAACUUUCU - 23
Evidence	experimental Illumina [1]

Mature dvi-miR-9701a-3p

Accession	MIMAT0039251
Description	Drosophila virilis dvi-miR-9701a-3p mature miRNA
Sequence	45 - AAAAUUGAUGUGGUUCACCGCU - 66
Evidence	experimental Illumina [1]

References

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250