Stem-loop dvi-mir-9701a

Accession

MI0030946

Description

Drosophila virilis dvi-mir-9701a precursor miRNA

Sequence

CUGUGUACCACCAUCAACUUUCUgcauuuagaaacucaauuaagAAAAUUGAUGUGGUUCACCGCUg
..(((.(((((.(((((.(((((..(((.((...)).)))..))))).)))))))))).))).....

Structure

---CU   U     C     C     gc   u  a 
     GUG ACCAC AUCAA UUUCU  auu ag  
     ||| ||||| ||||| |||||  ||| || a
     CAC UGGUG UAGUU AAAga  uaa uc  
gUCGC   U     -     A     au   c  a 

Annotation confidence Low

Genome context

scaffold_12855: 6284350-6284416 [-]

Clustered miRNAs

9 other miRNAs are < 10 kb from dvi-mir-9701a

Mature dvi-miR-9701a-5p

• Accession: MIMAT0039250
• Description: Drosophila virilis dvi-miR-9701a-5p mature miRNA
• Sequence: 1 - CUGUGUACCACCAUCAACUUUCU - 23
• Evidence: experimental ; Illumina [1]

Mature dvi-miR-9701a-3p

• Accession: MIMAT0039251
• Description: Drosophila virilis dvi-miR-9701a-3p mature miRNA
• Sequence: 45 - AAAAUUGAUGUGGUUCACCGCU - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24985917
   Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
   "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
   "Genome Res (2014) 24:1236-1250