Stem-loop dvi-mir-9701b

Accession

MI0030947

Description

Drosophila virilis dvi-mir-9701b precursor miRNA

Sequence

CGGUGAACCACAUCAAUUUUCUuaauugaguuucuaaaugcagAAAGUUGAUGGUGGUACACAGc
..(((.((((((((((((((((..(((.........)))..))))))))))).))))).)))...

Structure

-CG   A     -           ua   gag 
   GUG ACCAC AUCAAUUUUCU  auu   u
   ||| ||||| |||||||||||  |||   u
   CAC UGGUG UAGUUGAAAga  uaa   u
cGA   A     G           cg   auc 

Annotation confidence Low

Genome context

scaffold_12855: 6284353-6284417 [+]

Clustered miRNAs

9 other miRNAs are < 10 kb from dvi-mir-9701b

Mature dvi-miR-9701b-5p

• Accession: MIMAT0039252
• Description: Drosophila virilis dvi-miR-9701b-5p mature miRNA
• Sequence: 1 - CGGUGAACCACAUCAAUUUUCU - 22
• Evidence: experimental ; Illumina [1]

Mature dvi-miR-9701b-3p

• Accession: MIMAT0039253
• Description: Drosophila virilis dvi-miR-9701b-3p mature miRNA
• Sequence: 44 - AAAGUUGAUGGUGGUACACAG - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24985917
   Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
   "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
   "Genome Res (2014) 24:1236-1250