Stem-loop dvi-mir-9702

Accession

MI0030948

Description

Drosophila virilis dvi-mir-9702 precursor miRNA

Sequence

UGAGCGUCGGUUGGUGUUUGcuuucguccgugcacuugaUUAAACCCAACAAACGCUUAAa
(((((((..(((((.(((((...(((..........))).))))))))))..)))))))..

Structure

--       CG     U     cuu   uccg 
  UGAGCGU  GUUGG GUUUG   ucg    u
  |||||||  ||||| |||||   |||     
  AUUCGCA  CAACC CAAAU   agu    g
aA       AA     -     --U   ucac 

Annotation confidence Low

Genome context

scaffold_12855: 6286659-6286719 [+]

Clustered miRNAs

9 other miRNAs are < 10 kb from dvi-mir-9702

Mature dvi-miR-9702-5p

• Accession: MIMAT0039254
• Description: Drosophila virilis dvi-miR-9702-5p mature miRNA
• Sequence: 1 - UGAGCGUCGGUUGGUGUUUG - 20
• Evidence: experimental ; Illumina [1]

Mature dvi-miR-9702-3p

• Accession: MIMAT0039255
• Description: Drosophila virilis dvi-miR-9702-3p mature miRNA
• Sequence: 40 - UUAAACCCAACAAACGCUUAA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24985917
   Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
   "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
   "Genome Res (2014) 24:1236-1250