Stem-loop dvi-mir-9706b-1

Accession

MI0030953

Description

Drosophila virilis dvi-mir-9706b-1 precursor miRNA

Sequence

UACAGACUGCACCAAGCUUUAAuaaaugugaagauaauuaAUGCUUGAUGCUGUCUAUAAUUa
...((((.(((.(((((.(((((...(((....)))))))).))))).))).)))).......

Structure

----UAC    U   C     U     aaa   g 
       AGAC GCA CAAGC UUAAu   ugu a
       |||| ||| ||||| |||||   |||  
       UCUG CGU GUUCG Aauua   aua a
aUUAAUA    U   A     U     ---   g 

Annotation confidence Not enough data

Genome context

scaffold_12723: 4640892-4640954 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from dvi-mir-9706b-1

Mature dvi-miR-9706b-5p

• Accession: MIMAT0039264
• Description: Drosophila virilis dvi-miR-9706b-5p mature miRNA
• Sequence: 1 - UACAGACUGCACCAAGCUUUAA - 22
• Evidence: experimental ; Illumina [1]

Mature dvi-miR-9706b-3p

• Accession: MIMAT0039265
• Description: Drosophila virilis dvi-miR-9706b-3p mature miRNA
• Sequence: 41 - AUGCUUGAUGCUGUCUAUAAUU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24985917
   Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
   "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
   "Genome Res (2014) 24:1236-1250