Stem-loop dvi-mir-9704-2

Accession

MI0030955

Description

Drosophila virilis dvi-mir-9704-2 precursor miRNA

Sequence

ccggaugaaccgUGCAAAUUGUUUUUCGUAUUACuuauuucaauuauguUGAACGGGAAACAAUUUGUGuagcuugccuggagaagcaaccuaaa
.(((.....))).((((((((((((((((...((.((.......)).))...)))))))))))))))).(((.((((........)))).)))..

Structure

--------------ccggaugaaccgU                AUU  u  uu 
                           GCAAAUUGUUUUUCGU   AC ua  u
                           ||||||||||||||||   || ||  c
                           UGUUUAACAAAGGGCA   ug au  a
aaauccaacgaagagguccguucgauG                AGU  u  ua 

Annotation confidence Low

Genome context

scaffold_12963: 329857-329951 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from dvi-mir-9704-2

Mature dvi-miR-9704-5p

• Accession: MIMAT0039258
• Description: Drosophila virilis dvi-miR-9704-5p mature miRNA
• Sequence: 13 - UGCAAAUUGUUUUUCGUAUUAC - 34
• Evidence: experimental ; Illumina [1]

Mature dvi-miR-9704-2-3p

• Accession: MIMAT0039268
• Description: Drosophila virilis dvi-miR-9704-2-3p mature miRNA
• Sequence: 50 - UGAACGGGAAACAAUUUGUG - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24985917
   Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
   "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
   "Genome Res (2014) 24:1236-1250