Stem-loop dvi-mir-9708c

Accession

MI0030962

Description

Drosophila virilis dvi-mir-9708c precursor miRNA

Sequence

UGAGCACAGCUAAACAUAUAAUuuuuuuuuuacaaguucuUAUGUGUGUUAGCUGGGCUCAUGa
(((((.(((((((((((((((...(((......)))...)))))))).))))))).)))))...

Structure

---     A       -        Uuu   uu 
   UGAGC CAGCUAA ACAUAUAA   uuu  u
   ||||| ||||||| ||||||||   |||   
   ACUCG GUCGAUU UGUGUAUu   gaa  u
aGU     G       G        cuu   ca 

Annotation confidence Low

Genome context

scaffold_13042: 2032606-2032669 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from dvi-mir-9708c

Mature dvi-miR-9708c-5p

• Accession: MIMAT0039273
• Description: Drosophila virilis dvi-miR-9708c-5p mature miRNA
• Sequence: 1 - UGAGCACAGCUAAACAUAUAAU - 22
• Evidence: experimental ; Illumina [1]

Mature dvi-miR-9708c-3p

• Accession: MIMAT0039274
• Description: Drosophila virilis dvi-miR-9708c-3p mature miRNA
• Sequence: 41 - UAUGUGUGUUAGCUGGGCUCAUG - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24985917
   Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
   "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
   "Genome Res (2014) 24:1236-1250