Stem-loop dvi-mir-9708d

Accession

MI0030963

Description

Drosophila virilis dvi-mir-9708d precursor miRNA

Sequence

UGAUCGCGUCUAAGACAUAUAAuuuauacuugacuuAUAUGCAGUAGAUGUGAUCGCGu
.(((((((((((...(((((((.(((....))).)))))))...)))))))))))....

Structure

---U           AGA       u   u 
    GAUCGCGUCUA   CAUAUAA uua a
    |||||||||||   ||||||| |||  
    CUAGUGUAGAU   GUAUAuu agu c
uGCG           GAC       c   u 

Annotation confidence Low

Genome context

scaffold_13042: 2032476-2032534 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from dvi-mir-9708d

Mature dvi-miR-9708d-5p

• Accession: MIMAT0039275
• Description: Drosophila virilis dvi-miR-9708d-5p mature miRNA
• Sequence: 1 - UGAUCGCGUCUAAGACAUAUAA - 22
• Evidence: experimental ; Illumina [1]

Mature dvi-miR-9708d-3p

• Accession: MIMAT0039276
• Description: Drosophila virilis dvi-miR-9708d-3p mature miRNA
• Sequence: 37 - AUAUGCAGUAGAUGUGAUCGCG - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24985917
   Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
   "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
   "Genome Res (2014) 24:1236-1250