Stem-loop dvi-mir-9710

Accession

MI0030969

Description

Drosophila virilis dvi-mir-9710 precursor miRNA

Sequence

UUUGCACACCGGGUCUUCGUAUacgugauuuggcaaaccguUGGAAGAUCCGCUAUGUAAAAUu
((((((...(((((((((....(((((......))...)))..)))))))))...))))))...

Structure

---      CAC         GUAU   ---  au 
   UUUGCA   CGGGUCUUC    acg   ug  u
   ||||||   |||||||||    |||   ||   
   AAAUGU   GCCUAGAAG    ugc   ac  u
uUA      AUC         --GU   caa  gg 

Annotation confidence Low

Genome context

scaffold_12970: 9428001-9428064 [-]

Clustered miRNAs

17 other miRNAs are < 10 kb from dvi-mir-9710

Mature dvi-miR-9710-5p

• Accession: MIMAT0039287
• Description: Drosophila virilis dvi-miR-9710-5p mature miRNA
• Sequence: 1 - UUUGCACACCGGGUCUUCGUAU - 22
• Evidence: experimental ; Illumina [1]

Mature dvi-miR-9710-3p

• Accession: MIMAT0039288
• Description: Drosophila virilis dvi-miR-9710-3p mature miRNA
• Sequence: 42 - UGGAAGAUCCGCUAUGUAAAAU - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24985917
   Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
   "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
   "Genome Res (2014) 24:1236-1250