miRBase entry: dvi-mir-9710

Stem-loop dvi-mir-9710

Accession

MI0030969

Description

Drosophila virilis dvi-mir-9710 precursor miRNA

Sequence

UUUGCACACCGGGUCUUCGUAUacgugauuuggcaaaccguUGGAAGAUCCGCUAUGUAAAAUu
((((((...(((((((((....(((((......))...)))..)))))))))...))))))...

Structure

---      CAC         GUAU   ---  au 
   UUUGCA   CGGGUCUUC    acg   ug  u
   ||||||   |||||||||    |||   ||   
   AAAUGU   GCCUAGAAG    ugc   ac  u
uUA      AUC         --GU   caa  gg

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

scaffold_12970: 9428001-9428064 [-]

Clustered miRNAs

17 other miRNAs are < 10 kb from dvi-mir-9710

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dvi-miR-9710-5p

Accession	MIMAT0039287
Description	Drosophila virilis dvi-miR-9710-5p mature miRNA
Sequence	1 - UUUGCACACCGGGUCUUCGUAU - 22
Evidence	experimental Illumina [1]

Mature dvi-miR-9710-3p

Accession	MIMAT0039288
Description	Drosophila virilis dvi-miR-9710-3p mature miRNA
Sequence	42 - UGGAAGAUCCGCUAUGUAAAAU - 63
Evidence	experimental Illumina [1]

References

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250