miRBase entry: dvi-mir-9711

Accession

MI0030971

Description

Drosophila virilis dvi-mir-9711 precursor miRNA

Sequence

UCAGUUAGCAAUUGAAGCAUUCAuuuugcuaauuugAAUGUUUCACUUGGUACUUGG
.(((.((.(((.(((((((((((...........))))))))))).))).)).))).

Structure

U   U  G   U           uuuu 
 CAG UA CAA UGAAGCAUUCA    g
 ||| || ||| |||||||||||    c
 GUU AU GUU ACUUUGUAAgu    u
G   C  G   C           uuaa

Annotation confidence Not enough data

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Genome context

scaffold_12970: 9427098-9427154 [-]

Clustered miRNAs

18 other miRNAs are < 10 kb from dvi-mir-9711

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Accession	MIMAT0039289
Description	Drosophila virilis dvi-miR-9711-5p mature miRNA
Sequence	1 - UCAGUUAGCAAUUGAAGCAUUCA - 23
Evidence	experimental Illumina [1]

Accession	MIMAT0039290
Description	Drosophila virilis dvi-miR-9711-3p mature miRNA
Sequence	37 - AAUGUUUCACUUGGUACUUGG - 57
Evidence	experimental Illumina [1]

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250