Stem-loop dvi-mir-9713

Accession

MI0030973

Description

Drosophila virilis dvi-mir-9713 precursor miRNA

Sequence

7355 reads, 39.0 reads per million, 26 experiments

ACUUACUUGUUCAACAAUGCGaggauuguauggaaauuauaauCGCAUGCUGAUCAAGUGUGUCAua
((.((((((.(((.((.(((((...(((((.......)))))))))))).))).)))))).))....

Structure

----  U      U   A  A     gga     ug 
    AC UACUUG UCA CA UGCGa   uugua  g
    || |||||| ||| || |||||   |||||  a
    UG GUGAAC AGU GU ACGCu   aauau  a
auAC  U      U   C  -     ---     ua 

Annotation confidence High

Genome context

scaffold_12970: 9426638-9426704 [-]

Clustered miRNAs

19 other miRNAs are < 10 kb from dvi-mir-9713

Mature dvi-miR-9713-5p

• Accession: MIMAT0039293
• Description: Drosophila virilis dvi-miR-9713-5p mature miRNA
• Sequence: 1 - ACUUACUUGUUCAACAAUGCG - 21
• Evidence: experimental ; Illumina [1]

Mature dvi-miR-9713-3p

• Accession: MIMAT0039294
• Description: Drosophila virilis dvi-miR-9713-3p mature miRNA
• Sequence: 44 - CGCAUGCUGAUCAAGUGUGUCA - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24985917
   Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
   "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
   "Genome Res (2014) 24:1236-1250