miRBase entry: dvi-mir-9713

Stem-loop dvi-mir-9713

Accession

MI0030973

Description

Drosophila virilis dvi-mir-9713 precursor miRNA

Sequence

ACUUACUUGUUCAACAAUGCGAGgauuguauggaaauuauaaucgCAUGCUGAUCAAGUGUGUCAUa
((.((((((.(((.((.(((((...(((((.......)))))))))))).))).)))))).))....

Structure

----  U      U   A  A     Gga     ug 
    AC UACUUG UCA CA UGCGA   uugua  g
    || |||||| ||| || |||||   |||||  a
    UG GUGAAC AGU GU ACgcu   aauau  a
aUAC  U      U   C  -     ---     ua

Annotation confidence Not enough data

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Genome context

scaffold_12970: 9426638-9426704 [-]

Clustered miRNAs

19 other miRNAs are < 10 kb from dvi-mir-9713

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dvi-miR-9713-5p

Accession	MIMAT0039293
Description	Drosophila virilis dvi-miR-9713-5p mature miRNA
Sequence	1 - ACUUACUUGUUCAACAAUGCGAG - 23
Evidence	experimental Illumina [1]

Mature dvi-miR-9713-3p

Accession	MIMAT0039294
Description	Drosophila virilis dvi-miR-9713-3p mature miRNA
Sequence	46 - CAUGCUGAUCAAGUGUGUCAU - 66
Evidence	experimental Illumina [1]

References

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250