miRBase entry: dvi-mir-9714

Stem-loop dvi-mir-9714

Accession

MI0030974

Description

Drosophila virilis dvi-mir-9714 precursor miRNA

Sequence

UGACACACUUGAUCAGCAUGCGauuauaauuuccauacaauccucgCAUUGUUGAACAAGUAAGUCAUag
((((..(((((.(((((((((((....................))))).)))))).)))))..))))...

Structure

---    AC     A      -     uuauaauuu 
   UGAC  ACUUG UCAGCA UGCGa         c
   ||||  ||||| |||||| |||||          
   ACUG  UGAAC AGUUGU ACgcu         c
gaU    AA     A      U     ccuaacaua

Annotation confidence Not enough data

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Genome context

scaffold_12970: 9426640-9426709 [+]

Clustered miRNAs

19 other miRNAs are < 10 kb from dvi-mir-9714

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dvi-miR-9714-5p

Accession	MIMAT0039295
Description	Drosophila virilis dvi-miR-9714-5p mature miRNA
Sequence	1 - UGACACACUUGAUCAGCAUGCG - 22
Evidence	experimental Illumina [1]

Mature dvi-miR-9714-3p

Accession	MIMAT0039296
Description	Drosophila virilis dvi-miR-9714-3p mature miRNA
Sequence	47 - CAUUGUUGAACAAGUAAGUCAU - 68
Evidence	experimental Illumina [1]

References

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250