Stem-loop dvi-mir-9714

Accession

MI0030974

Description

Drosophila virilis dvi-mir-9714 precursor miRNA

Sequence

UGACACACUUGAUCAGCAUGCGauuauaauuuccauacaauccucgCAUUGUUGAACAAGUAAGUCAUag
((((..(((((.(((((((((((....................))))).)))))).)))))..))))...

Structure

---    AC     A      -     uuauaauuu 
   UGAC  ACUUG UCAGCA UGCGa         c
   ||||  ||||| |||||| |||||          
   ACUG  UGAAC AGUUGU ACgcu         c
gaU    AA     A      U     ccuaacaua 

Annotation confidence Low

Genome context

scaffold_12970: 9426640-9426709 [+]

Clustered miRNAs

19 other miRNAs are < 10 kb from dvi-mir-9714

Mature dvi-miR-9714-5p

• Accession: MIMAT0039295
• Description: Drosophila virilis dvi-miR-9714-5p mature miRNA
• Sequence: 1 - UGACACACUUGAUCAGCAUGCG - 22
• Evidence: experimental ; Illumina [1]

Mature dvi-miR-9714-3p

• Accession: MIMAT0039296
• Description: Drosophila virilis dvi-miR-9714-3p mature miRNA
• Sequence: 47 - CAUUGUUGAACAAGUAAGUCAU - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24985917
   Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
   "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
   "Genome Res (2014) 24:1236-1250