miRBase entry: dvi-mir-9716

Stem-loop dvi-mir-9716

Accession

MI0030980

Description

Drosophila virilis dvi-mir-9716 precursor miRNA

Sequence

AGCUGCAGUUGACGUCGACAGCGcuugcggcgCUGCCCGUUGGCUGCCAGCUGCc
((((((((((((((..(.(((((((...)))))))).))))))))).)))))...

Structure

---     -         UC A       u 
   AGCUG CAGUUGACG  G CAGCGcu  
   ||||| |||||||||  | ||||||| g
   UCGAC GUCGGUUGC  C GUCgcgg  
cCG     C         -C -       c

Annotation confidence Not enough data

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Genome context

scaffold_12855: 2693707-2693761 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from dvi-mir-9716

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dvi-miR-9716-5p

Accession	MIMAT0039305
Description	Drosophila virilis dvi-miR-9716-5p mature miRNA
Sequence	1 - AGCUGCAGUUGACGUCGACAGCG - 23
Evidence	experimental Illumina [1]

Mature dvi-miR-9716-3p

Accession	MIMAT0039306
Description	Drosophila virilis dvi-miR-9716-3p mature miRNA
Sequence	33 - CUGCCCGUUGGCUGCCAGCUGC - 54
Evidence	experimental Illumina [1]

References

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250