Stem-loop dvi-mir-9717

Accession

MI0030981

Description

Drosophila virilis dvi-mir-9717 precursor miRNA

Sequence

CAUUGGUGUGCCCGCUUAUGAgggacucgcaaucAUUAAGCUAACACAUCAAUACAa
.(((((((((...((((((((..(.....)..))).)))))...)))))))))....

Structure

---C         CCC     -   gg a 
    AUUGGUGUG   GCUUA UGA  g c
    |||||||||   ||||| |||  | u
    UAACUACAC   CGAAU Acu  c c
aACA         AAU     U   aa g 

Annotation confidence Low

Genome context

scaffold_13047: 1194059-1194115 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from dvi-mir-9717

Mature dvi-miR-9717-5p

• Accession: MIMAT0039307
• Description: Drosophila virilis dvi-miR-9717-5p mature miRNA
• Sequence: 1 - CAUUGGUGUGCCCGCUUAUGA - 21
• Evidence: experimental ; Illumina [1]

Mature dvi-miR-9717-3p

• Accession: MIMAT0039308
• Description: Drosophila virilis dvi-miR-9717-3p mature miRNA
• Sequence: 35 - AUUAAGCUAACACAUCAAUACA - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24985917
   Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
   "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
   "Genome Res (2014) 24:1236-1250