Stem-loop dvi-mir-9719

Accession

MI0030984

Description

Drosophila virilis dvi-mir-9719 precursor miRNA

Sequence

UGGGCACUUCUAAAAUAUAUAuauauauauauauauauauuuguugauaauugaacuuaUAUAUUUUAGCCGUGUUCCAUGa
(((((((..(((((((((((((((((((....)))))))...(((.(....).))).))))))))))))..))).))))...

Structure

---    -   UU            ------------------       a 
   UGGG CAC  CUAAAAUAUAUA                  uauauau u
   |||| |||  ||||||||||||                  |||||||  
   ACCU GUG  GAUUUUAUAUau                  auauaua a
aGU    U   CC            ucaaguuaauaguuguuu       u 

Annotation confidence Low

Genome context

scaffold_13042: 2032315-2032396 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from dvi-mir-9719

Mature dvi-miR-9719-5p

• Accession: MIMAT0039311
• Description: Drosophila virilis dvi-miR-9719-5p mature miRNA
• Sequence: 1 - UGGGCACUUCUAAAAUAUAUA - 21
• Evidence: experimental ; Illumina [1]

Mature dvi-miR-9719-3p

• Accession: MIMAT0039312
• Description: Drosophila virilis dvi-miR-9719-3p mature miRNA
• Sequence: 60 - UAUAUUUUAGCCGUGUUCCAUG - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24985917
   Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
   "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
   "Genome Res (2014) 24:1236-1250