Stem-loop dvi-mir-9720

Accession

MI0030985

Description

Drosophila virilis dvi-mir-9720 precursor miRNA

Sequence

8781 reads, 40.0 reads per million, 37 experiments

aCCUACUCAGCCGUCAAUCUUuauaguuauauaaagaaaacUAUGGUUAACGACUAAGCAAGUAGc
..(((((..((.(((.....((((((((..........)))))))).....)))...)).))))).

Structure

aC     CA  --C   AAUCU        auau 
  CUACU  GC   GUC     Uuauaguu    a
  |||||  ||   |||     ||||||||     
  GAUGA  CG   CAG     GGUAUcaa    a
-c     -A  AAU   CAAUU        aaga 

Annotation confidence Medium

Genome context

scaffold_12970: 9426838-9426903 [+]

Clustered miRNAs

18 other miRNAs are < 10 kb from dvi-mir-9720

Mature dvi-miR-9720-5p

• Accession: MIMAT0039313
• Description: Drosophila virilis dvi-miR-9720-5p mature miRNA
• Sequence: 2 - CCUACUCAGCCGUCAAUCUU - 21
• Evidence: experimental ; Illumina [1]

Mature dvi-miR-9720-3p

• Accession: MIMAT0039314
• Description: Drosophila virilis dvi-miR-9720-3p mature miRNA
• Sequence: 42 - UAUGGUUAACGACUAAGCAAGUAG - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24985917
   Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
   "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
   "Genome Res (2014) 24:1236-1250