Stem-loop ggo-mir-515-1

Accession

MI0031067

Description

Gorilla gorilla ggo-mir-515-1 precursor miRNA

Literature search

1 open access papers mention ggo-mir-515-1
(2 sentences)

Sequence

uuggagcgagaagaucucaugcagucaUUCUCCAAAAGAAAGCACUUUCUGuugucugaaagcaGAGUGCCUUCUUUUGGAGCGUUacuguuugagaaaaaccgcguugaaguug
((((.(((.(....(((((.(((((.((.(((((((((((.((((..((((((.......)))))))))).))))))))))).)).))))).)))))....)))).)))).....

Structure

-----    a   a aaga     u     c  U           A    UU      gu 
     uugg gcg g    ucuca gcagu aU CUCCAAAAGAA GCAC  UCUGuu  c
     |||| ||| |    ||||| ||||| || ||||||||||| ||||  ||||||  u
     aguu cgc c    agagu uguca UG GAGGUUUUCUU CGUG  AGacga  g
guuga    g   - aaaa     u     U  C           C    --      aa 

Annotation confidence Low

Genome context

chr19: 53019793-53019907 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from ggo-mir-515-1

Mature ggo-miR-515-5p

• Accession: MIMAT0036405
• Description: Gorilla gorilla ggo-miR-515-5p mature miRNA
• Sequence: 28 - UUCUCCAAAAGAAAGCACUUUCUG - 51
• Evidence: not_experimental

Mature ggo-miR-515-3p

• Accession: MIMAT0036406
• Description: Gorilla gorilla ggo-miR-515-3p mature miRNA
• Sequence: 65 - GAGUGCCUUCUUUUGGAGCGUU - 86
• Evidence: not_experimental

References

1. PubMed ID: 24126940
   Exploration of miRNA families for hypotheses generation
   "Kamanu TK, Radovanovic A, Archer JA, Bajic VB"
   "Sci Rep (2013) 3:2940