miRBase entry: ggo-mir-519e

Stem-loop ggo-mir-519e

Accession

MI0031068

Description

Gorilla gorilla ggo-mir-519e precursor miRNA

Sequence

uuuggagcgagaagaucucaugcagucaUUCUCCAAAAGGGAGCACUUUCuguugucugaaagaaaacaAAGUGCCUCCUUUUAGAGUGUUacuguuugagaaaaaccaccuugaaguug
(((.(((........(((((.(((((.((.(((.(((((((.((((((..((((.(((...))).)))))))))).))))))).))).)).))))).)))))........))).)))...

Structure

---   g   cgagaaga     u     c  U   C       A      UC    g   g 
   uuu gag        ucuca gcagu aU CUC AAAAGGG GCACUU  uguu ucu  
   ||| |||        ||||| ||||| || ||| ||||||| ||||||  |||| ||| a
   gaa uuc        agagu uguca UG GAG UUUUCCU CGUGAA  acaa aga  
guu   g   caccaaaa     u     U  U   A       C      --    a   a

Annotation confidence Not enough data

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Genome context

chr19: 53020783-53020902 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from ggo-mir-519e

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ggo-miR-519e-5p

Accession	MIMAT0036407
Description	Gorilla gorilla ggo-miR-519e-5p mature miRNA
Sequence	29 - UUCUCCAAAAGGGAGCACUUUC - 50
Evidence	not_experimental

Mature ggo-miR-519e-3p

Accession	MIMAT0036408
Description	Gorilla gorilla ggo-miR-519e-3p mature miRNA
Sequence	70 - AAGUGCCUCCUUUUAGAGUGUU - 91
Evidence	not_experimental

References

PubMed ID: 24126940
Exploration of miRNA families for hypotheses generation
"Kamanu TK, Radovanovic A, Archer JA, Bajic VB"
"Sci Rep (2013) 3:2940