Stem-loop ggo-mir-515-2

Accession

MI0031070

Description

Gorilla gorilla ggo-mir-515-2 precursor miRNA

Literature search

1 open access papers mention ggo-mir-515-2
(2 sentences)

Sequence

uuggagcgagaagaucucaugcagucaUUCUCCAAAAGAAAGCACUUUCUGuugucugaaagcaGAGUGCCUUCUUUUGGAGCGUUacuguuugagaaaaaccacguugaaguug
....((((......(((((.(((((.((.(((((((((((.((((..((((((.......)))))))))).))))))))))).)).))))).))))).......)))).......

Structure

---uugg    -agaaga     u     c  U           A    UU      gu 
       agcg       ucuca gcagu aU CUCCAAAAGAA GCAC  UCUGuu  c
       ||||       ||||| ||||| || ||||||||||| ||||  ||||||  u
       uugc       agagu uguca UG GAGGUUUUCUU CGUG  AGacga  g
guugaag    accaaaa     u     U  C           C    --      aa 

Annotation confidence Not enough data

Genome context

chr19: 53028222-53028336 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from ggo-mir-515-2

Mature ggo-miR-515-5p

• Accession: MIMAT0036405
• Description: Gorilla gorilla ggo-miR-515-5p mature miRNA
• Sequence: 28 - UUCUCCAAAAGAAAGCACUUUCUG - 51
• Evidence: not_experimental

Mature ggo-miR-515-3p

• Accession: MIMAT0036406
• Description: Gorilla gorilla ggo-miR-515-3p mature miRNA
• Sequence: 65 - GAGUGCCUUCUUUUGGAGCGUU - 86
• Evidence: not_experimental

References

1. PubMed ID: 24126940
   Exploration of miRNA families for hypotheses generation
   "Kamanu TK, Radovanovic A, Archer JA, Bajic VB"
   "Sci Rep (2013) 3:2940