miRBase entry: ggo-mir-519c-1

Stem-loop ggo-mir-519c-1

Accession

MI0031071

Description

Gorilla gorilla ggo-mir-519c-1 precursor miRNA

Sequence

cuggagcaagaagaucccaugcugugaccCUCUAGAGGGAAGCGCUUUCUGuugucugaaagaagagAAAGUGCAUCCUUUUAGAGGUUuacuguuugaggaaagcagcggugaaguug
..............(((((.((.((((.((((((((((((.(((((((((.((.(.....).)).))))))))).)))))))))))).)))).)).)).)))...((((......))))

Structure

---cuggagcaagaaga   -  u  u    c            A         G  g c 
                 ucc ca gc guga cCUCUAGAGGGA GCGCUUUCU uu u u
                 ||| || || |||| |||||||||||| ||||||||| || | g
                 agg gu ug cauU GGAGAUUUUCCU CGUGAAAga aa a a
guugaaguggcgacgaa   a  u  u    U            A         g  g a

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

chr19: 53038851-53038969 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from ggo-mir-519c-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ggo-miR-519c-5p

Accession	MIMAT0036410
Description	Gorilla gorilla ggo-miR-519c-5p mature miRNA
Sequence	30 - CUCUAGAGGGAAGCGCUUUCUG - 51
Evidence	not_experimental

Mature ggo-miR-519c-3p

Accession	MIMAT0036411
Description	Gorilla gorilla ggo-miR-519c-3p mature miRNA
Sequence	68 - AAAGUGCAUCCUUUUAGAGGUU - 89
Evidence	not_experimental

References

PubMed ID: 24126940
Exploration of miRNA families for hypotheses generation
"Kamanu TK, Radovanovic A, Archer JA, Bajic VB"
"Sci Rep (2013) 3:2940