miRBase entry: ggo-mir-518f

Stem-loop ggo-mir-518f

Accession

MI0031074

Description

Gorilla gorilla ggo-mir-518f precursor miRNA

Sequence

uuggagcaagaagaucucaugcugugaccCUCUAGAGGGAAGCACUUUCUCuugucuaaaagaaaaGAAAGCGCUUCUCUUUAGAGGauuacucuuugagaaaagcaacauugaag
.((..((.......(((((....((((.(((((((((((((((.(((((((((......))))...))))).))))))))))))))).))))....)))))...))..))......

Structure

-----u  ga  aagaaga     ugcu    c               A     ---    gu 
      ug  gc       ucuca    guga cCUCUAGAGGGAAGC CUUUC   UCuu  c
      ||  ||       |||||    |||| ||||||||||||||| |||||   ||||   
      ac  cg       agagu    cauu GGAGAUUUCUCUUCG GAAAG   agaa  u
gaaguu  aa  ----aaa     uucu    a               C     aaa    aa

Annotation confidence Not enough data

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Genome context

chr19: 53043664-53043779 [+]

Clustered miRNAs

8 other miRNAs are < 10 kb from ggo-mir-518f

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ggo-miR-518f-5p

Accession	MIMAT0036416
Description	Gorilla gorilla ggo-miR-518f-5p mature miRNA
Sequence	30 - CUCUAGAGGGAAGCACUUUCUC - 51
Evidence	not_experimental

Mature ggo-miR-518f-3p

Accession	MIMAT0036417
Description	Gorilla gorilla ggo-miR-518f-3p mature miRNA
Sequence	67 - GAAAGCGCUUCUCUUUAGAGG - 87
Evidence	not_experimental

References

PubMed ID: 24126940
Exploration of miRNA families for hypotheses generation
"Kamanu TK, Radovanovic A, Archer JA, Bajic VB"
"Sci Rep (2013) 3:2940