miRBase entry: ggo-mir-518d

Stem-loop ggo-mir-518d

Accession

MI0031083

Description

Gorilla gorilla ggo-mir-518d precursor miRNA

Sequence

cuggagugagaagaucccaugcugugaccCUCUAGAGGGAAGCACUUUCUGuugucugaaagaaacCAAAGCGCUUCCCUUUGGAGCguuacgguuugagaaacucaauguugaaguug
......((((....((.((.((((((((.((((((((((((((.((((..(((.(((...)))))).)))).)))))))))))))).)))))))).)).))..))))............

Structure

------cuggag    aaga  c  u        c              A    CU   g   g 
            ugag    uc ca gcugugac CUCUAGAGGGAAGC CUUU  Guu ucu  
            ||||    || || |||||||| |||||||||||||| ||||  ||| ||| a
            acuc    ag gu uggcauug GAGGUUUCCCUUCG GAAA  caa aga  
guugaaguugua    --aa  a  u        C              C    -C   -   a

Annotation confidence Not enough data

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Genome context

chr19: 53078317-53078435 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from ggo-mir-518d

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ggo-miR-518d-5p

Accession	MIMAT0036429
Description	Gorilla gorilla ggo-miR-518d-5p mature miRNA
Sequence	30 - CUCUAGAGGGAAGCACUUUCUG - 51
Evidence	not_experimental

Mature ggo-miR-518d-3p

Accession	MIMAT0036430
Description	Gorilla gorilla ggo-miR-518d-3p mature miRNA
Sequence	67 - CAAAGCGCUUCCCUUUGGAGC - 87
Evidence	not_experimental

References

PubMed ID: 24126940
Exploration of miRNA families for hypotheses generation
"Kamanu TK, Radovanovic A, Archer JA, Bajic VB"
"Sci Rep (2013) 3:2940