miRBase entry: ggo-mir-519a-1

Stem-loop ggo-mir-519a-1

Accession

MI0031090

Description

Gorilla gorilla ggo-mir-519a-1 precursor miRNA

Sequence

gcaagaagaucucaggcugugacaCUCUAGAGGGAAGCGCUUUCUGuuuucugaaaaagAAAGUGCAUCCUUUUAGAGUGUuacuguuugagaaaagcaacguugaag
.........((((((((.(((((((((((((((((.(((((((((............))))))))).))))))))))))))))).))))))))...............

Structure

------gcaagaaga        u                 A         Guuuu 
               ucucaggc gugacaCUCUAGAGGGA GCGCUUUCU     c
               |||||||| ||||||||||||||||| |||||||||      
               agaguuug cauUGUGAGAUUUUCCU CGUGAAAga     u
gaaguugcaacgaaa        u                 A         aaaag

Annotation confidence Not enough data

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Genome context

chr19: 53097153-53097260 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from ggo-mir-519a-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ggo-miR-519a-5p

Accession	MIMAT0036439
Description	Gorilla gorilla ggo-miR-519a-5p mature miRNA
Sequence	25 - CUCUAGAGGGAAGCGCUUUCUG - 46
Evidence	not_experimental

Mature ggo-miR-519a-3p

Accession	MIMAT0036440
Description	Gorilla gorilla ggo-miR-519a-3p mature miRNA
Sequence	60 - AAAGUGCAUCCUUUUAGAGUGU - 81
Evidence	not_experimental

References

PubMed ID: 24126940
Exploration of miRNA families for hypotheses generation
"Kamanu TK, Radovanovic A, Archer JA, Bajic VB"
"Sci Rep (2013) 3:2940