Accession
MI0031103
Description
Pongo pygmaeus
ppy-mir-517c-1 precursor miRNA
Sequence
ugugacCCUCUAGAUGGAAGCACUGUCUguugucuaauaaaagAUCGUGCAUCCUUUUAGAGUGUuacuguuugagaaaagcaacguugaag
.(((((.(((((((.(((.((((.((((.((((...)))).)))).)))).))).))))))).)))))(((((.....))))).........
.(((((.(((((((.(((.((((.((((.((((...)))).)))).)))).))).))))))).)))))(((((.....))))).........
Structure
-----------------------u C U A U g c
gugac CUCUAGA GGA GCAC GUCU uugu
||||| ||||||| ||| |||| |||| |||| u
cauUG GAGAUUU CCU CGUG UAga aaua
gaaguugcaacgaaaagaguuugu U U A C a a
Annotation confidence
Low
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Genome context
chr19: 55492961-55493052 [+]
Clustered miRNAs
7 other miRNAs are < 10 kb from ppy-mir-517c-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ppy-miR-517c-5p
| Accession | MIMAT0036447 |
| Description | Pongo pygmaeus ppy-miR-517c-5p mature miRNA |
| Sequence | 7 - CCUCUAGAUGGAAGCACUGUCU - 28 |
| Evidence | not_experimental |
Mature ppy-miR-517c-??
| Accession | MIMAT0036449 |
| Description | Pongo pygmaeus ppy-miR-517c-?? mature miRNA |
| Sequence | 44 - AUCGUGCAUCCUUUUAGAGUGU - 65 |
| Evidence | not_experimental |
References
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