Accession
MI0031110
Description
Pan troglodytes
ptr-mir-519f precursor miRNA
Sequence
105
reads,
19.0
reads per million, 8 experiments
gcaagaagaccucaggcugugacaCUCUAGAGGGAAGCGCUUUCUGUUuucugaaaaagAAAGUGCAUCCUUUUAGAGUGUUacuguuugagaaaagcaacguugaag
..........(((((((.(((((((((((((((((.(((((((((............))))))))).))))))))))))))))).)))))))................
..........(((((((.(((((((((((((((((.(((((((((............))))))))).))))))))))))))))).)))))))................
Structure
------gcaagaagac u A GUUuu
cucaggc gugacaCUCUAGAGGGA GCGCUUUCU c
||||||| ||||||||||||||||| |||||||||
gaguuug caUUGUGAGAUUUUCCU CGUGAAAga u
gaaguugcaacgaaaa u A aaaag
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr19: 56099801-56099908 [+]
Clustered miRNAs
8 other miRNAs are < 10 kb from ptr-mir-519f
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ptr-miR-519f-5p
| Accession | MIMAT0036456 |
| Description | Pan troglodytes ptr-miR-519f-5p mature miRNA |
| Sequence | 25 - CUCUAGAGGGAAGCGCUUUCUGUU - 48 |
| Evidence | not_experimental |
Mature ptr-miR-519f-3p
| Accession | MIMAT0036457 |
| Description | Pan troglodytes ptr-miR-519f-3p mature miRNA |
| Sequence | 60 - AAAGUGCAUCCUUUUAGAGUGUU - 82 |
| Evidence | not_experimental |
References
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