miRBase entry: ame-mir-9871

Stem-loop ame-mir-9871

Accession

MI0031797

Description

Apis mellifera ame-mir-9871 precursor miRNA

Sequence

acauauugacguaauaucauccgaucuuuagagcuucuaugauuggaUGCGGUAAAGGUCGGGUGAGCguucguaauu
...(((.(((((....((((((((((((((..((.((((....)))).))..))))))))))))))))))).)))...

Structure

aca   u     aaua              ga  u    u 
   uau gacgu    ucauccgaucuuua  gc ucua g
   ||| |||||    ||||||||||||||  || ||||  
   aug uugCG    AGUGGGCUGGAAAU  CG aggu a
uua   c     ----              GG  U    u

Annotation confidence Not enough data

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Genome context

CM000054.5: 27076250-27076327 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ame-mir-9871

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ame-miR-9871-3p

Accession	MIMAT0037275
Description	Apis mellifera ame-miR-9871-3p mature miRNA
Sequence	48 - UGCGGUAAAGGUCGGGUGAGC - 68
Evidence	experimental Illumina [1]

References

PubMed ID: 24136738
The integrative analysis of microRNA and mRNA expression in Apis mellifera following maze-based visual pattern learning
"Qin QH, Wang ZL, Tian LQ, Gan HY, Zhang SW, Zeng ZJ"
"Insect Sci (2014) 21:619-636