Stem-loop gma-MIR10193a

Accession

MI0032960

Description

Glycine max gma-MIR10193a precursor miRNA

Sequence

caucaguuuuUCUGAAACCGAUGUUAACUACUcgauauuaacaaccgauguuaguaucgaguuguuaacaucgguuugggaaaaaucgaugu
((((.((((((((.((((((((((((((.((((((((((((((.....)))))))))))))).)))))))))))))).)))))))).)))).

Structure

-    a        G              U              a 
 cauc guuuuUCU AAACCGAUGUUAAC ACUcgauauuaaca c
 |||| |||||||| |||||||||||||| |||||||||||||| c
 guag uaaaaagg uuuggcuacaauug ugagcuaugauugu g
u    c        g              u              a 

Annotation confidence Not enough data

Genome context

chr16: 22348358-22348449 [+]

Mature gma-miR10193a

• Accession: MIMAT0040960
• Description: Glycine max gma-miR10193a mature miRNA
• Sequence: 11 - UCUGAAACCGAUGUUAACUACU - 32
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25747880
   Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
   "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
   "Plant Cell (2015) 27:546-562


2. PubMed ID: 25465409
   An atlas of soybean small RNAs identifies phased siRNAs from hundreds of coding genes
   "Arikit S, Xia R, Kakrana A, Huang K, Zhai J, Yan Z, Valdes-Lopez O, Prince S, Musket TA, Nguyen HT, Stacey G, Meyers BC"
   "Plant Cell (2014) 26:4584-4601