Stem-loop gma-MIR10197

Accession

MI0032964

Description

Glycine max gma-MIR10197 precursor miRNA

Sequence

aaaagauaacAUUUUAGAACGACUUUUUCCUuuaaccggucuaaaagguuaaccuuuuagauugguuauaggaaaaaaucguucuaaaaaguauauuauuu
....((((((.(((((((((((.((((((((.((((((((((((((((....)))))))))))))))).)))))))).))))))))))).)).))))....

Structure

aaaa    -  A           C        u                u 
    gaua ac UUUUAGAACGA UUUUUCCU uaaccggucuaaaagg u
    |||| || ||||||||||| |||||||| ||||||||||||||||  
    uuau ug aaaaucuugcu aaaaagga auugguuagauuuucc a
uuua    a  a           a        u                a 

Annotation confidence Not enough data

Genome context

chr1: 33086656-33086756 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from gma-MIR10197

Mature gma-miR10197

• Accession: MIMAT0040964
• Description: Glycine max gma-miR10197 mature miRNA
• Sequence: 11 - AUUUUAGAACGACUUUUUCCU - 31
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25747880
   Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
   "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
   "Plant Cell (2015) 27:546-562


2. PubMed ID: 25465409
   An atlas of soybean small RNAs identifies phased siRNAs from hundreds of coding genes
   "Arikit S, Xia R, Kakrana A, Huang K, Zhai J, Yan Z, Valdes-Lopez O, Prince S, Musket TA, Nguyen HT, Stacey G, Meyers BC"
   "Plant Cell (2014) 26:4584-4601