Stem-loop cgr-mir-148a

Accession

MI0033061

Description

Cricetulus griseus cgr-mir-148a precursor miRNA

Literature search

1 open access papers mention cgr-mir-148a
(1 sentences)

Sequence

25036531 reads, 54700.0 reads per million, 45 experiments

gaggcAAAGUUCUGAGACACUUCGACUcugaguaugauagaagUCAGUGCACUACAGAACUUUGUcuc
((((((((((((((((.((((..(((((((.......))).))))))))..)).))))))))))))))

Structure

              -  -A    UC    -   ag 
gaggcAAAGUUCUG AG  CACU  GACU cug  u
|||||||||||||| ||  ||||  |||| |||  a
cucUGUUUCAAGAC UC  GUGA  CUga gau  u
              A  AC    --    a   ag 

Annotation confidence High

Genome context

JH000116.1: 864991-865058 [+]

Mature cgr-miR-148a-5p

• Accession: MIMAT0052490
• Description: Cricetulus griseus cgr-miR-148a-5p mature miRNA
• Sequence: 6 - AAAGUUCUGAGACACUUCGACU - 27
• Evidence: not_experimental

Mature cgr-miR-148a-3p

• Accession: MIMAT0041133
• Description: Cricetulus griseus cgr-miR-148a-3p mature miRNA
• Sequence: 44 - UCAGUGCACUACAGAACUUUGU - 65
• Evidence: not_experimental

References

1. PubMed ID: 25689160
   Annotation of additional evolutionary conserved microRNAs in CHO cells from updated genomic data
   "Diendorfer AB, Hackl M, Klanert G, Jadhav V, Reithofer M, Stiefel F, Hesse F, Grillari J, Borth N"
   "Biotechnol Bioeng (2015) 112:1488-1493