Stem-loop cgr-mir-194-2

Accession

MI0033062

Description

Cricetulus griseus cgr-mir-194-2 precursor miRNA

Sequence

30779 reads, 495 reads per million, 6 experiments

uggcugccacccccuguaacagcaacuccauguggaagugcccacuaguuCCAGUGGGGCUGCUGUUAUCUGggguggaggcugg
.((((.(((((((..(((((((((.((((((.(((((.((.....)).))))))))))).)))))))))..))))))).))))..

Structure

-u    g       cu         a      g     g  c 
  ggcu ccacccc  guaacagca cuccau uggaa ug c
  |||| |||||||  ||||||||| |||||| ||||| || c
  ucgg ggugggG  UAUUGUCGU GGGGUG ACCuu au a
gg    a       UC         C      -     g  c 

Annotation confidence Low

Genome context

JH001367.1: 289932-290016 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cgr-mir-194-2

Mature cgr-miR-194-2

• Accession: MIMAT0041134
• Description: Cricetulus griseus cgr-miR-194-2 mature miRNA
• Sequence: 51 - CCAGUGGGGCUGCUGUUAUCUG - 72
• Evidence: not_experimental

References

1. PubMed ID: 25689160
   Annotation of additional evolutionary conserved microRNAs in CHO cells from updated genomic data
   "Diendorfer AB, Hackl M, Klanert G, Jadhav V, Reithofer M, Stiefel F, Hesse F, Grillari J, Borth N"
   "Biotechnol Bioeng (2015) 112:1488-1493