miRBase entry: cgr-mir-217

Stem-loop cgr-mir-217


Accession
MI0033063
Description
Cricetulus griseus cgr-mir-217 precursor miRNA


Sequence

7921 reads, 77 reads per million, 6 experiments
ucaacacaguugucacaguuuuugaugucguagaUACUGCAUCAGGAACUGAUUGGAuaagacaaggucaccaucagucccuaaugcauuaccuucagcaucuaaaaaac
.((((...)))).....(((((((((((.(.((.((.(((((.(((.((((((.((((........))).).)))))).))).))))).)).)).).)))))..))))))

Structure
ucaacacaguugucaca      --     c u  a  C     C   A      U -   aag 
                 guuuuu  gaugu g ag UA UGCAU AGG ACUGAU G GAu   a
                 ||||||  ||||| | || || ||||| ||| |||||| | |||    
                 caaaaa  cuacg c uc au acgua ucc ugacua c cug   c
-----------------      au     a u  c  u     a   c      c a   gaa 


Annotation confidence Low
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Genome context
JH001619.1: 193561-193670 [+]

Database links

Mature cgr-miR-217

Accession MIMAT0041135
Description Cricetulus griseus cgr-miR-217 mature miRNA
Sequence 35 - UACUGCAUCAGGAACUGAUUGGA - 57
Evidence not_experimental

References

  1. PubMed ID: 25689160
    Annotation of additional evolutionary conserved microRNAs in CHO cells from updated genomic data
    "Diendorfer AB, Hackl M, Klanert G, Jadhav V, Reithofer M, Stiefel F, Hesse F, Grillari J, Borth N"
    "Biotechnol Bioeng (2015) 112:1488-1493