miRBase entry: cgr-mir-219b

Stem-loop cgr-mir-219b


Accession
MI0033064
Description
Cricetulus griseus cgr-mir-219b precursor miRNA


Sequence

4442 reads, 57 reads per million, 6 experiments
ggagcucaaccacagauguccagccacaauucucgguuggccgcagacucguacaAGAAUUGCGUUUGGACAAUCAGUggcgaagccc
((.(((...((((.(((((((((.(.((((((((((((.......))).))....))))))).).)))))).))).))))...)))))

Structure
  a   caa    a   -      c a       ----  -   gg 
gg gcu   ccac gau guccag c caauucu    cg guu  c
|| |||   |||| ||| |||||| | |||||||    || |||  c
cc cga   ggUG CUA CAGGUU G GUUAAGA    gc cag  g
  -   agc    A   A      U C       acau  u   ac 


Annotation confidence Not enough data
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Genome context
JH001652.1: 238829-238916 [-]

Database links

Mature cgr-miR-219b

Accession MIMAT0041136
Description Cricetulus griseus cgr-miR-219b mature miRNA
Sequence 56 - AGAAUUGCGUUUGGACAAUCAGU - 78
Evidence not_experimental

References

  1. PubMed ID: 25689160
    Annotation of additional evolutionary conserved microRNAs in CHO cells from updated genomic data
    "Diendorfer AB, Hackl M, Klanert G, Jadhav V, Reithofer M, Stiefel F, Hesse F, Grillari J, Borth N"
    "Biotechnol Bioeng (2015) 112:1488-1493