Stem-loop cgr-mir-449a

Accession

MI0033069

Description

Cricetulus griseus cgr-mir-449a precursor miRNA

Literature search

1 open access papers mention cgr-mir-449a
(2 sentences)

Sequence

815 reads, 4.0 reads per million, 52 experiments

cugugugugacggguUGGCAGUGUAUUGUUAGCUGGUugaauaugugaaaggcaccagcuaacaugcaacugcuauccugucgcacauaca
.(((((((((((((.(((((((((((.((((((((((.(..(.......)..))))))))))))))).))))))).)))))))))))))..

Structure

-c             u       -    U          u aa au 
  ugugugugacggg UGGCAGU GUAU GUUAGCUGGU g  u  g
  ||||||||||||| ||||||| |||| |||||||||| |  |  u
  auacacgcugucc aucguca cgua caaucgacca c  a  g
ac             u       a    -          - gg aa 

Annotation confidence Not enough data

Genome context

JH001768.1: 250492-250582 [-]

Mature cgr-miR-449a-5p

• Accession: MIMAT0041140
• Description: Cricetulus griseus cgr-miR-449a-5p mature miRNA
• Sequence: 16 - UGGCAGUGUAUUGUUAGCUGGU - 37
• Evidence: not_experimental

References

1. PubMed ID: 25689160
   Annotation of additional evolutionary conserved microRNAs in CHO cells from updated genomic data
   "Diendorfer AB, Hackl M, Klanert G, Jadhav V, Reithofer M, Stiefel F, Hesse F, Grillari J, Borth N"
   "Biotechnol Bioeng (2015) 112:1488-1493