miRBase entry: cgr-mir-1b

Stem-loop cgr-mir-1b


Accession
MI0033083
Description
Cricetulus griseus cgr-mir-1b precursor miRNA


Sequence

5995 reads, 69 reads per million, 6 experiments
gaaagcauugcuccucuugguggccauuaccuacccaaaauacguacuucuuuacauuccauagcaguguauguucauaUGGGUACAUAAAGAAGUAUGUGCucugaguaggcacugcugag
...((((.((((.(((..(((((.......))))).....((((((((((((((...(((((((((.....)))...))))))....))))))))))))))....)))..)))).))))...

Structure
gaa    u    -c   uugguggccauuaccuacccaaaa              -cau      ---   g 
   agca ugcu  cuc                        uacguacuucuuua    uccaua   gca u
   |||| ||||  |||                        ||||||||||||||    ||||||   ||| g
   ucgu acgg  gag                        GUGUAUGAAGAAAU    GGGUau   ugu u
gag    c    au   --------------------ucuC              ACAU      acu   a 


Annotation confidence Low
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Genome context
JH000352.1: 491524-491645 [+]

Database links

Mature cgr-miR-1b

Accession MIMAT0041154
Description Cricetulus griseus cgr-miR-1b mature miRNA
Sequence 80 - UGGGUACAUAAAGAAGUAUGUGC - 102
Evidence not_experimental

References

  1. PubMed ID: 25689160
    Annotation of additional evolutionary conserved microRNAs in CHO cells from updated genomic data
    "Diendorfer AB, Hackl M, Klanert G, Jadhav V, Reithofer M, Stiefel F, Hesse F, Grillari J, Borth N"
    "Biotechnol Bioeng (2015) 112:1488-1493