miRBase entry: cgr-mir-3074-1

Stem-loop cgr-mir-3074-1


Accession
MI0033090
Description
Cricetulus griseus cgr-mir-3074-1 precursor miRNA


Sequence

439232 reads, 74 reads per million, 6 experiments
gggcucgacuccuGUUCCUGCUGAACUGAGCCAGUgugugaaaugagaacugauaucagcucaguaggcaccggagggcgggu
..(((((.((((.((.((((((((.((((..((((.............))))...)))).)))))))).)).))))..)))))

Structure
gg     -a    u  U        A    -GC    gugug 
  gcucg  cucc GU CCUGCUGA CUGA   CAGU     a
  |||||  |||| || |||||||| ||||   ||||     a
  ugggc  gagg ca ggaugacu gacu   guca     a
--     gg    c  c        c    aua    agagu 


Annotation confidence Low
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Genome context
JH002734.1: 35910-35992 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from cgr-mir-3074-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cgr-miR-3074

Accession MIMAT0041160
Description Cricetulus griseus cgr-miR-3074 mature miRNA
Sequence 14 - GUUCCUGCUGAACUGAGCCAGU - 35
Evidence not_experimental

References

  1. PubMed ID: 25689160
    Annotation of additional evolutionary conserved microRNAs in CHO cells from updated genomic data
    "Diendorfer AB, Hackl M, Klanert G, Jadhav V, Reithofer M, Stiefel F, Hesse F, Grillari J, Borth N"
    "Biotechnol Bioeng (2015) 112:1488-1493