miRBase entry: cgr-mir-330

Stem-loop cgr-mir-330


Accession
MI0033099
Description
Cricetulus griseus cgr-mir-330 precursor miRNA


Sequence

14327 reads, 163 reads per million, 6 experiments
acccuuuggcgaucucugccucucugggccugugucuuaggcucuucaggcucuaacgaGCAAAGCACAGGGCCUGCAGAGAgguagcgcuccgcuc
.......(((((.(.(((((((((((((((((((.(((..((((.............)))).))))))).))))..))))))))))).).).)))).

Structure
acccuuu    - u u           --    -    u   ag    uucag 
       ggcg a c cugccucucug  ggcc ugug cuu  gcuc     g
       |||| | | |||||||||||  |||| |||| |||  ||||     c
       ucgc u g gauggAGAGAC  CCGG ACAC GAA  CGag     u
------c    c c c           GU    G    -   -A    caauc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature cgr-miR-330

Accession MIMAT0041169
Description Cricetulus griseus cgr-miR-330 mature miRNA
Sequence 60 - GCAAAGCACAGGGCCUGCAGAGA - 82
Evidence not_experimental

References

  1. PubMed ID: 25689160
    Annotation of additional evolutionary conserved microRNAs in CHO cells from updated genomic data
    "Diendorfer AB, Hackl M, Klanert G, Jadhav V, Reithofer M, Stiefel F, Hesse F, Grillari J, Borth N"
    "Biotechnol Bioeng (2015) 112:1488-1493