Stem-loop cgr-mir-18b

Accession

MI0033101

Description

Cricetulus griseus cgr-mir-18b precursor miRNA

Literature search

1 open access papers mention cgr-mir-18b
(1 sentences)

Sequence

5900 reads, 49 reads per million, 6 experiments

ucuuguguUAAGGUGCAUCUAGUGCAGUUAGugaagcagcuuagacucuacugcccuaaaugccccuucucgcacaggc
.(((((((.((((.((((.(((.(((((.(((.(((...)))..)))..))))).))).)))).))))...))))))).

Structure

u       --U    U    C   U     -U   -g   c 
 cuugugu   AAGG GCAU UAG GCAGU  AGu  aag  
 |||||||   |||| |||| ||| |||||  |||  ||| a
 ggacacg   uucc cgua auc cguca  uca  uuc  
c       cuc    c    a   c     uc   ga   g 

Annotation confidence Not enough data

Genome context

JH000353.1: 898951-899029 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cgr-mir-18b

Mature cgr-miR-18b

• Accession: MIMAT0041171
• Description: Cricetulus griseus cgr-miR-18b mature miRNA
• Sequence: 9 - UAAGGUGCAUCUAGUGCAGUUAG - 31
• Evidence: not_experimental

References

1. PubMed ID: 25689160
   Annotation of additional evolutionary conserved microRNAs in CHO cells from updated genomic data
   "Diendorfer AB, Hackl M, Klanert G, Jadhav V, Reithofer M, Stiefel F, Hesse F, Grillari J, Borth N"
   "Biotechnol Bioeng (2015) 112:1488-1493