Stem-loop cgr-mir-20b

Accession

MI0033102

Description

Cricetulus griseus cgr-mir-20b precursor miRNA

Literature search

1 open access papers mention cgr-mir-20b
(1 sentences)

Sequence

1989 reads, 27 reads per million, 6 experiments

guaguacCAAAGUGCUCAUAGUGCAGGUAGuuuugcaucauucuacugcacugugagcacuuccaguacucuug
..(((((..(((((((((((((((((.(((............))))))))))))))))))))...)))))....

Structure

--gu     -CA                 G   uuuug 
    aguac   AAGUGCUCAUAGUGCAG UAG     c
    |||||   ||||||||||||||||| |||      
    ucaug   uucacgagugucacguc auc     a
guuc     acc                 -   uuacu 

Annotation confidence Low

Genome context

JH000353.1: 898733-898806 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cgr-mir-20b

Mature cgr-miR-20b

• Accession: MIMAT0041172
• Description: Cricetulus griseus cgr-miR-20b mature miRNA
• Sequence: 8 - CAAAGUGCUCAUAGUGCAGGUAG - 30
• Evidence: not_experimental

References

1. PubMed ID: 25689160
   Annotation of additional evolutionary conserved microRNAs in CHO cells from updated genomic data
   "Diendorfer AB, Hackl M, Klanert G, Jadhav V, Reithofer M, Stiefel F, Hesse F, Grillari J, Borth N"
   "Biotechnol Bioeng (2015) 112:1488-1493