Stem-loop egr-mir-10228

Accession

MI0033109

Description

Echinococcus granulosus egr-mir-10228 precursor miRNA

Sequence

caguaUGAGUAUUGUACCAUGCGGUGAgugaccuugucuccuuccaccuacucaUUGCAGGGUAGAAUACUCCcacca
..((..(((((((.((((.(((((((((((..................))))))))))).)))).)))))))..))..

Structure

ca  aU       G    A           accuuguc 
  gu  GAGUAUU UACC UGCGGUGAgug        u
  ||  ||||||| |||| |||||||||||         
  ca  CUCAUAA AUGG ACGUUacucau        c
ac  cC       G    G           ccaccuuc 

Annotation confidence Not enough data

Genome context

APAU02000061.1: 48091-48168 [-]

Mature egr-miR-10228-5p

• Accession: MIMAT0041185
• Description: Echinococcus granulosus egr-miR-10228-5p mature miRNA
• Sequence: 6 - UGAGUAUUGUACCAUGCGGUGA - 27
• Evidence: experimental ; Illumina [1]

Mature egr-miR-10228-3p

• Accession: MIMAT0041186
• Description: Echinococcus granulosus egr-miR-10228-3p mature miRNA
• Sequence: 55 - UUGCAGGGUAGAAUACUCC - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25168356
   Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
   Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
   BMC Genomics (2014) 15:736