Stem-loop egr-mir-10231

Accession

MI0033119

Description

Echinococcus granulosus egr-mir-10231 precursor miRNA

Sequence

aggucGGGUCAUUCUGAUAGUUCAGAuaaacggguCAGAACUAUCGGAAUGGCAGUuuuga
.......((((((((((((((((.(((......))).))))))))))))))))........

Structure

-aggucGG                A   aa 
        GUCAUUCUGAUAGUUC GAu  a
        |||||||||||||||| |||   
        CGGUAAGGCUAUCAAG Cug  c
aguuuUGA                A   gg 

Annotation confidence Not enough data

Genome context

APAU02000079.1: 310226-310286 [-]

Mature egr-miR-10231-5p

• Accession: MIMAT0041205
• Description: Echinococcus granulosus egr-miR-10231-5p mature miRNA
• Sequence: 6 - GGGUCAUUCUGAUAGUUCAGA - 26
• Evidence: experimental ; Illumina [1]

Mature egr-miR-10231-3p

• Accession: MIMAT0041206
• Description: Echinococcus granulosus egr-miR-10231-3p mature miRNA
• Sequence: 36 - CAGAACUAUCGGAAUGGCAGU - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25168356
   Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
   Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
   BMC Genomics (2014) 15:736