Stem-loop egr-mir-10232

Accession

MI0033120

Description

Echinococcus granulosus egr-mir-10232 precursor miRNA

Sequence

gguggCCUCCAUUUCCGGUUCGAAUGGgcgcauaacuaccGCUCGAACUGGGGUUGAAGCcagcu
(.((((.((.(.(((((((((((.(((...........))).))))))))))).))).)))).).

Structure

- g    C  C U           A   gcgc 
 g uggC UC A UUCCGGUUCGA UGG    a
 | |||| || | ||||||||||| |||    u
 c acCG AG U GGGGUCAAGCU Gcc    a
u g    A  - U           C   auca 

Annotation confidence Not enough data

Genome context

APAU02000025.1: 843986-844050 [-]

Mature egr-miR-10232-5p

• Accession: MIMAT0041207
• Description: Echinococcus granulosus egr-miR-10232-5p mature miRNA
• Sequence: 6 - CCUCCAUUUCCGGUUCGAAUGG - 27
• Evidence: experimental ; Illumina [1]

Mature egr-miR-10232-3p

• Accession: MIMAT0041208
• Description: Echinococcus granulosus egr-miR-10232-3p mature miRNA
• Sequence: 41 - GCUCGAACUGGGGUUGAAGC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25168356
   Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
   Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
   BMC Genomics (2014) 15:736