Stem-loop egr-mir-10235

Accession

MI0033123

Description

Echinococcus granulosus egr-mir-10235 precursor miRNA

Sequence

uuuucUGAACUCUGUCAUUAAAUUUGCuagucguagcAAAUGUGUGGACGAGUUCGCGAaaaac
((((((((((((.(((.....((((((((....)))))))).....)))))))))).)))))..

Structure

--     -       U   AUUAA        g 
  uuuuc UGAACUC GUC     AUUUGCua u
  ||||| ||||||| |||     ||||||||  
  aaaAG GCUUGAG CAG     UAAAcgau c
ca     C       -   GUGUG        g 

Annotation confidence Not enough data

Genome context

APAU02000076.1: 160450-160513 [+]

Mature egr-miR-10235-5p

• Accession: MIMAT0041213
• Description: Echinococcus granulosus egr-miR-10235-5p mature miRNA
• Sequence: 6 - UGAACUCUGUCAUUAAAUUUGC - 27
• Evidence: experimental ; Illumina [1]

Mature egr-miR-10235-3p

• Accession: MIMAT0041214
• Description: Echinococcus granulosus egr-miR-10235-3p mature miRNA
• Sequence: 38 - AAAUGUGUGGACGAGUUCGCGA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25168356
   Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
   Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
   BMC Genomics (2014) 15:736