Stem-loop egr-mir-10236

Accession

MI0033124

Description

Echinococcus granulosus egr-mir-10236 precursor miRNA

Sequence

aauuuGAAAUGCCGAGGGCUUGGAGGacaucguaucugcaUCAAGGCUCACGGCAUUUCCUcacac
.....(((((((((.(((((((.(((........))).))....))))).))))))))).......

Structure

--aauuu         A     ----  G   aca 
       GAAAUGCCG GGGCU    UG AGG   u
       ||||||||| |||||    || |||    
       CUUUACGGC CUCGG    ac ucu   c
cacacUC         A     AACU  g   aug 

Annotation confidence Not enough data

Genome context

APAU02000010.1: 1558302-1558367 [-]

Mature egr-miR-10236-5p

• Accession: MIMAT0041215
• Description: Echinococcus granulosus egr-miR-10236-5p mature miRNA
• Sequence: 6 - GAAAUGCCGAGGGCUUGGAGG - 26
• Evidence: experimental ; Illumina [1]

Mature egr-miR-10236-3p

• Accession: MIMAT0041216
• Description: Echinococcus granulosus egr-miR-10236-3p mature miRNA
• Sequence: 41 - UCAAGGCUCACGGCAUUUCCU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25168356
   Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
   Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
   BMC Genomics (2014) 15:736