Stem-loop egr-mir-10241

Accession

MI0033129

Description

Echinococcus granulosus egr-mir-10241 precursor miRNA

Sequence

ggcugUGAAUGGCUAGAGGCAUCAAGgacauccauacauacgguugcccuUGAACCGUUUCUACCAUUCAUAauccu
((.(((((((((.(((((((.((((((.((.((........)).)).))))))...))))))))))))))))..)).

Structure

-  -c         C       --A      a  u  aua 
 gg  ugUGAAUGG UAGAGGC   UCAAGg ca cc   c
 ||  ||||||||| |||||||   |||||| || ||    
 cc  AUACUUACC AUCUUUG   AGUucc gu gg   a
u  ua         -       CCA      c  u  cau 

Annotation confidence Not enough data

Genome context

APAU02000008.1: 1606466-1606542 [-]

Mature egr-miR-10241-5p

• Accession: MIMAT0041225
• Description: Echinococcus granulosus egr-miR-10241-5p mature miRNA
• Sequence: 6 - UGAAUGGCUAGAGGCAUCAAG - 26
• Evidence: experimental ; Illumina [1]

Mature egr-miR-10241-3p

• Accession: MIMAT0041226
• Description: Echinococcus granulosus egr-miR-10241-3p mature miRNA
• Sequence: 51 - UGAACCGUUUCUACCAUUCAUA - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25168356
   Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
   Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
   BMC Genomics (2014) 15:736